A reusable platform-independent API call component for protein metadata alignment, annotation, and integration across major protein data resources.

Atomic Charge Calculator - web application using the Electronegativity Equalization Method.

Benchmark Energy and geometry DataBase is available through web interface with integrated analytical tools.

The BioXSD / GTrack ecosystem is an infrastructure of generic state-of-the-art data formats for integrative bioinformatics, with focus on genomics and epigenomics, sequence and structure bioinformatics, and other applications. 

Continuous automated benchmarking of computational protein structure prediction methods (and model quality estimation techniques). CAMEO assessment is based on blind predictions for weekly pre-released targets from PDB. 

A classification of protein structures and sequences that groups protein domains into superfamilies. 

Tool for analysis of molecular channels in proteins. CAVER Analyst allows interactive visualization of the channels and cavities in protein structures.

The CRISPRdb database and services are leading international resources for CRISPR sequence analysis. 

System for identification of alterations using protein mass spectrometry.

Web interface for assignment and analysis of DNA conformers.

Database Of Local Biomolecumal COnfromers.

These include the Human Developmental Studies Network (HuDSeN), emouseatlas.org, echickatlas.org, and macrophages.com, a gene expression atlas of the domestic pig.

Web server for identification of hot spots in protein engineering.

Database with millions of high-resolution images.

InterPro classifies proteins into families and predicts the presence of important domains and sites.

Non-coding genome sequences and genetic network tools. The IRESite presents experimental evidence of many eukaryotic viral and cellular internal ribosome entry site (IRES) regions.

Toolkit for rapid and fully automated location and characterization of channels, tunnels and pores in (bio)macromolecular structures, e.g., proteins, RNA, DNA and biomacromolecular assemblies.

Web interface providing a direct access to MOLE 2.0 functionality and enabling on-line and easy-to-use interactive channel analysis.

Web based application to validate ligand structure in PDB.

Software to identify defined fragents in biomacromolecules.

Pfam is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs). 

A suite of tools available on the web to predict and analyze protein structure, function and mutations. 

The Protein Data Bank in Europe (PDBe) is the European part of the wwPDB for the collection, organisation and dissemination of data on biological macromolecular structures.

Web tool for prediction of rRNA secondary structures.

Web server for RNA structure comparison.

Web application to compare multiple protein structural motifs.

SWISS-MODEL Repository is a continuously updated database of annotated protein structure homology models generated by the fully automated SWISS-MODEL modelling pipeline. 

SWISS-MODEL is a fully automated service for protein structure homology modelling. It provides a personal web based workspace for interactive modelling, storing project data and visualizing results online. 

This resource includes sequence pipeline (TarO) analysis, a secondary prediction (JPred) structure server, and a protein kinase database and kinase classification pipeline (Kinomer).