Services
| Name of service | Tag | ELIXIR Node | Related links* | Key Collection | |
|---|---|---|---|---|---|
| Rhea | Rhea is a comprehensive and non-redundant resource of expert-curated biochemical reactions described using species from the ChEBI (Chemical Entities of Biological Interest) ontology of small molecules. |
ELIXIR Switzerland | bio.toolsFAIRsharingTeSS | CDD | |
| SABIO-RK | Web interface accessing a curated database with information about biochemical reactions and kinetic properties in an experimental or environmental context. |
ELIXIR Germany | bio.tools | ||
| SIGNOR | The SIGnaling Network Open Resource annotates signaling information from the literature as binary causative relationships. |
ELIXIR Italy | bio.toolsFAIRsharing | ||
| STRING | STRING is a database of known and predicted protein-protein interactions. The database contains information from numerous sources, including experimental repositories, computational prediction methods and public text collections. |
ELIXIR Switzerland | bio.toolsFAIRsharingTeSS | CDD | |
| SulfAtlas | SulfAtlas is a knowledge-based database which (i) helps to better annotate sulfatases in (meta)genomic data and notably to improve the prediction of substrate specificities; (ii) guides the experimental biologists to select target sulfatases which remain to be characterized in term of function and structure. The data contained in SulfAtlas is curated by experts, based on our phylogeny-based classification system and on literature. |
ELIXIR France | bio.tools | ||
| The B6 database | Contains tools for the functional classification of PLP-dependent enzymes in predicted protein sequences. |
ELIXIR Italy | bio.tools | ||
| UniProtKB | UniProt produces and maintains automatic and manually curated annotation of all publicly available protein sequences and serves these to users through various interfaces. |
ELIXIR Switzerland, EMBL-EBI | bio.toolsFAIRsharingTeSS | CDD | |
| WikiPathways | An open, collaborative platform dedicated to the curation of biological pathways |
ELIXIR Netherlands | bio.toolsFAIRsharingTeSS |