Improving lipidomics data submission workflows in metaboLights (SEP 2024-01)

This Staff Exchange will support collaboration between Forschungszentrum Jülich (ELIXIR Germany) and EMBL-EBI to enhance the handling of lipidomics data in MetaboLights. The focus is aligning the lipidomics checklist with the ISA-JSON model, improving support for the mzTab-M format and initiating development of validation approaches to support high-quality lipidomics submissions.

The work contributes to better interoperability within ELIXIR’s metabolomics infrastructure and strengthens collaboration between ELIXIR Germany and EMBL-EBI.

Open source software and workflows: a driving force for innovation in life sciences

This report shows that open, well-maintained software and analytical workflows are essential foundations for modern life science research and innovation. They allow scientists to handle large, complex datasets, apply advanced analytical methods and build reliable, reproducible processes across academia and industry.