Implementation Studies

Implementation Studies are short technical projects that guide future service development, drive standards adoption and connect ELIXIR Nodes (see Who we are).

They are funded through the budget of the ELIXIR Hub and form part of our ongoing activities in a particular Platform or Community. They are proposed by Platforms, agreed with the ELIXIR Heads of Nodes committee and approved by the ELIXIR Board.

Name of study Platform/Community Nodes involved
A Scalable approach to Personal FAIR Data Management and Analysis Human Data, Compute, Interoperability, Galaxy ELIXIR Netherlands, ELIXIR Italy, EMBL-EBI
Annotation and curation of human genomic variations (2018-Variations) Human Data, Compute, Data, Interoperability ELIXIR Finland, EMBL-EBI, ELIXIR Switzerland, ELIXIR UK, ELIXIR Norway, ELIXIR Italy
Apple as a Model for Genomic Information Exchange Data, Plant Sciences ELIXIR Italy, ELIXIR Belgium , EMBL-EBI
Beacon (2019-21) Human Data ELIXIR Switzerland, EMBL-EBI, ELIXIR Spain, ELIXIR Finland, ELIXIR Luxembourg, ELIXIR Sweden
Bioschemas: Community Adoption and Training Interoperability ELIXIR UK, EMBL-EBI, ELIXIR France, ELIXIR Belgium , ELIXIR Netherlands, ELIXIR Italy
Crowd-sourcing the annotation of public proteomics datasets to improve data reusability Proteomics EMBL-EBI, ELIXIR Belgium , ELIXIR Germany, ELIXIR Netherlands, ELIXIR Denmark, ELIXIR Switzerland, ELIXIR France, ELIXIR Sweden, ELIXIR Spain, ELIXIR Norway
Establishment of an ELIXIR Contextual Data Clearinghouse Data, Marine Metagenomics ELIXIR Norway, EMBL-EBI, ELIXIR Germany, ELIXIR Italy
Extending open proteomics data analysis pipelines in the cloud: Additional tools and focus on scalability, supporting the dramatic growth of public proteomics data Data, Compute, Tools, Proteomics ELIXIR Belgium , EMBL-EBI, ELIXIR Germany, ELIXIR France, ELIXIR Spain
FAIRification of Genomic Tracks Human Data, Interoperability ELIXIR Norway, EMBL-EBI, ELIXIR Spain
FAIRness of the current ELIXIR Core resources: Application (and test) of newly available FAIR metrics, and identification of steps to increase interoperability (2018-FAIRCDR) Data, Interoperability, Training, Rare Diseases ELIXIR Netherlands, ELIXIR UK, EMBL-EBI, ELIXIR Italy, ELIXIR Sweden
Galaxy Community Galaxy ELIXIR Belgium , ELIXIR France, ELIXIR Germany, ELIXIR Norway, ELIXIR Italy, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Spain, ELIXIR UK, ELIXIR Czech Republic, ELIXIR Slovenia
Galaxy Community Implementation Study Galaxy ELIXIR Belgium , ELIXIR France, ELIXIR Germany, ELIXIR Norway, ELIXIR Italy, ELIXIR Czech Republic, ELIXIR Netherlands, ELIXIR Spain, ELIXIR UK, ELIXIR Switzerland, ELIXIR Slovenia
Increasing Interoperability between ELIXIR Protein Structure and Sequence Resources and Expanding these Resources with 3D-Models of CATH Domains, built by SWISS-MODEL Data, Interoperability, Human Data ELIXIR UK, ELIXIR Switzerland, EMBL-EBI
Integrating ELIXIR Italy into ELIXIR activities Data, Human Data, Rare Disease, Interoperability, Tools, Marine Metagenomics ELIXIR Italy
Integrating reference taxonomic databases for metabarcoding and metagenomics identification (2018-taxometabarcode) Data, Marine Metagenomics ELIXIR Italy, EMBL-EBI
Integration and standardization of intrinsically disordered protein data (2018-IDPs) Data, Interoperability ELIXIR Italy, EMBL-EBI, ELIXIR Switzerland, ELIXIR Hungary, ELIXIR Ireland
Mapping the landscape of Biocuration in ELIXIR: Practice, capability and training requirements Training, Data, Interoperability ELIXIR UK, ELIXIR Switzerland, EMBL-EBI, ELIXIR Luxembourg, ELIXIR Slovenia
Metabolite Identification (2018-Metabolomics) Metabolomics, Data, Interoperability, Tools ELIXIR Netherlands, EMBL-EBI, ELIXIR France, ELIXIR UK, ELIXIR Germany, ELIXIR Spain, ELIXIR Sweden, ELIXIR Italy, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Belgium
Rare Disease Infrastructure Human Data ELIXIR Spain, ELIXIR Italy, ELIXIR Luxembourg, ELIXIR Netherlands, EMBL-EBI, ELIXIR France, ELIXIR UK
Towards Data Stewardship in ELIXIR: Training & Portal Training ELIXIR Netherlands, ELIXIR Czech Republic, ELIXIR Luxembourg, ELIXIR Switzerland, ELIXIR Slovenia, ELIXIR UK, ELIXIR Estonia, ELIXIR Portugal, ELIXIR France, ELIXIR Norway, EMBL-EBI, ELIXIR Sweden, ELIXIR Belgium