Commissioned Services

ELIXIR's Commissioned Services are technical projects that guide future service development, drive standards adoption and connect ELIXIR Nodes (see Who we are).

They are funded through the budget of the ELIXIR Hub and form part of our ongoing activities in a particular Platform or Community. They are proposed by Platforms, agreed with the ELIXIR Heads of Nodes committee and approved by the ELIXIR Board.

Name of study Platform/Community Nodes involved
2015-2016 Beacon project Federated Human Data ELIXIR Finland, ELIXIR Spain, ELIXIR Sweden, ELIXIR Switzerland, ELIXIR Belgium , ELIXIR Netherlands, EMBL-EBI, ELIXIR France
A microbial metabolism resource for Systems Biology Data, Microbial biotechnology ELIXIR Switzerland, ELIXIR France, EMBL-EBI
A Scalable approach to Personal FAIR Data Management and Analysis Federated Human Data, Compute, Interoperability, Galaxy ELIXIR Netherlands, ELIXIR Italy, EMBL-EBI
AAI production Compute ELIXIR Czech Republic, ELIXIR Finland, ELIXIR Germany, ELIXIR Luxembourg, ELIXIR Spain
Annotating ELIXIR services for Registry inclusion Tools
Annotation and curation of human genomic variations (2018-Variations) Federated Human Data, Compute, Data, Interoperability ELIXIR Finland, EMBL-EBI, ELIXIR Switzerland, ELIXIR UK, ELIXIR Norway, ELIXIR Italy
Apple as a Model for Genomic Information Exchange Data, Plant Sciences ELIXIR Italy, ELIXIR Belgium , EMBL-EBI
Architecture for Software Containers at ELIXIR and its use by EXCELERATE Use Case Communities (2018-Biocontainers) Tools, Compute, Training, Federated Human Data, Rare Diseases EMBL-EBI, ELIXIR Germany, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Italy
Beacon & Beacon Network As A Service Federated Human Data ELIXIR Finland, ELIXIR Switzerland, ELIXIR Spain, ELIXIR Belgium , ELIXIR France, ELIXIR Netherlands, ELIXIR Norway, ELIXIR Italy, EMBL-EBI
Beacon (2019-21) Federated Human Data ELIXIR Switzerland, EMBL-EBI, ELIXIR Spain, ELIXIR Finland, ELIXIR Luxembourg, ELIXIR Sweden
BILS-ProteomeXchange integration using EUDAT resources Data ELIXIR Sweden, EMBL-EBI
Bioschemas Interoperability ELIXIR Netherlands, ELIXIR UK, EMBL-EBI
Bioschemas: Community Adoption and Training Interoperability ELIXIR UK, EMBL-EBI, ELIXIR France, ELIXIR Belgium , ELIXIR Netherlands, ELIXIR Italy
Building the foundation for Data Carpentry and Software Carpentry within ELIXIR Training ELIXIR UK, ELIXIR Norway, ELIXIR Finland, ELIXIR Italy, ELIXIR Belgium , ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Slovenia, ELIXIR Estonia, ELIXIR Czech Republic, ELIXIR France, ELIXIR Israel, ELIXIR Portugal
Capacity Building Interoperability ELIXIR UK, ELIXIR Norway, ELIXIR Portugal, ELIXIR Italy, ELIXIR Sweden, ELIXIR Netherlands, ELIXIR Estonia, ELIXIR Finland, ELIXIR Belgium , ELIXIR France, ELIXIR Czech Republic
Comparison, benchmarking and dissemination of proteomics data analysis pipelines Tools, Data, Compute, Proteomics, Metabolomics ELIXIR Denmark, EMBL-EBI, ELIXIR Netherlands, ELIXIR Spain, ELIXIR France, ELIXIR Sweden, ELIXIR Italy, ELIXIR Czech Republic, ELIXIR Germany
Compatible Cloud Analysis Platform Compute ELIXIR Finland, EMBL-EBI
Container Orchestration Compute EMBL-EBI, ELIXIR Finland, ELIXIR Switzerland, ELIXIR Luxembourg, ELIXIR Czech Republic, ELIXIR Italy, ELIXIR UK, ELIXIR Sweden, ELIXIR Germany, ELIXIR Belgium , ELIXIR France, ELIXIR Denmark, ELIXIR Netherlands, ELIXIR Norway, ELIXIR Portugal, ELIXIR Slovenia
Crowd-sourcing the annotation of public proteomics datasets to improve data reusability Proteomics EMBL-EBI, ELIXIR Belgium , ELIXIR Germany, ELIXIR Netherlands, ELIXIR Denmark, ELIXIR Switzerland, ELIXIR France, ELIXIR Sweden, ELIXIR Spain, ELIXIR Norway
Data Integration for Compute Compute EMBL-EBI, ELIXIR Italy, ELIXIR Netherlands, ELIXIR Finland, ELIXIR Switzerland, ELIXIR France, ELIXIR Sweden, ELIXIR Germany, ELIXIR Belgium , ELIXIR Luxembourg, ELIXIR Norway, ELIXIR Portugal
Data Resource Implementations for the GA4GH Data Schema Federated Human Data EMBL-EBI, ELIXIR France, ELIXIR Switzerland
Data Validation Interoperability, Tools, Federated Human Data, Plant Sciences, Galaxy, Metabolomics, Marine Metagenomics ELIXIR Belgium , ELIXIR France, EMBL-EBI, ELIXIR UK
Deploying Reproducible Containers and Workflows Across Cloud Environments Compute, Tools EMBL-EBI, ELIXIR Spain, ELIXIR Germany, ELIXIR Finland, ELIXIR France, ELIXIR Denmark, ELIXIR Belgium , ELIXIR Sweden, ELIXIR Italy, ELIXIR Switzerland, ELIXIR UK, ELIXIR Netherlands
Developing learning paths for users of ELIXIR services Training ELIXIR UK, EMBL-EBI, ELIXIR Netherlands, ELIXIR France, ELIXIR Luxembourg, ELIXIR Estonia, ELIXIR Switzerland, ELIXIR Italy, ELIXIR Finland, ELIXIR Belgium
ELIXIR Data Input/Output (IO): Seamless, uninterrupted transfer of major datasets across Europe ELIXIR Finland, EMBL-EBI
ELIXIR Federated Human Data (2019-21) Federated Human Data ELIXIR Finland, EMBL-EBI, ELIXIR Spain, ELIXIR Switzerland, ELIXIR Netherlands, ELIXIR Sweden, ELIXIR Luxembourg, ELIXIR Norway, ELIXIR Czech Republic, ELIXIR Portugal, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Slovenia
ELIXIR Hybrid Cloud Compute ELIXIR Germany, ELIXIR Czech Republic, ELIXIR Netherlands, ELIXIR Spain, ELIXIR Italy, ELIXIR Finland, EMBL-EBI, ELIXIR UK, ELIXIR Luxembourg, ELIXIR Slovenia
ELIXIR integration from a user perspective Training, Tools, Marine Metagenomics, Plant Sciences, Rare Diseases, Galaxy, Metabolomics ELIXIR UK, ELIXIR Estonia, ELIXIR Belgium , ELIXIR Denmark, ELIXIR Switzerland, EMBL-EBI, ELIXIR Norway, ELIXIR France
ELIXIR Proof of concept study on the availability of big datasets on remote compute infrastructure (2017-DataMovement) Compute, Training, Galaxy ELIXIR Sweden, ELIXIR Germany, ELIXIR Czech Republic, EMBL-EBI, ELIXIR Finland
ELIXIR – IMI OncoTrack scoping study on long-term data handling Federated Human Data ELIXIR Spain, EMBL-EBI

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